ipo: warning #11010: file format not recognized for /opt/intel/bin

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Gets Around
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Posts 51
I am not sure what's happening, I specified this path for my ifort compiler, should I have specified it differently?

thanks

Jonas

nwchem.F(632): (col. 15) remark: BLOCK WAS VECTORIZED.
ifort -i8 -align -w -g -vec-report1 -O2 -g -L/home/jbaltrus/nwchem/6.4devJuly2013/nwchem-src-2013-07-19/lib/LINUX64 -L/home/jbaltrus/nwchem/6.4devJuly2013/nwchem-src-2013-07-19/src/tools/install/lib -o /home/jbaltrus/nwchem/6.4devJuly2013/nwchem-src-2013-07-19/bin/LINUX64/nwchem nwchem.o stubs.o -lnwctask -lccsd -lmcscf -lselci -lmp2 -lmoints -lstepper -ldriver -loptim -lnwdft -lgradients -lcphf -lesp -lddscf -ldangchang -lguess -lhessian -lvib -lnwcutil -lrimp2 -lproperty -lnwints -lprepar -lnwmd -lnwpw -lofpw -lpaw -lpspw -lband -lnwpwlib -lnwxc -lcafe -lspace -lanalyze -lqhop -lpfft -ldplot -ldrdy -lvscf -lqmmm -lqmd -letrans -lpspw -ltce -lbq -lcons -lperfm -ldntmc -lccca -lnwcutil -lga -larmci -lpeigs -lperfm -lcons -lbq -lnwcutil -llapack -lblas -L/usr/local/chemistry_software/openmpi-1.6.4-intel/lib /opt/intel/bin -lpthread -L/usr/local/chemistry_software/openmpi-1.6.4-intel/lib -lmpi_f90 -lmpi_f77 -lmpi -lstdc++
ipo: warning #11010: file format not recognized for /opt/intel/bin
/opt/intel/bin: file not recognized: Is a directory
make: *** [all] Error 1

Gets Around
Threads 27
Posts 51
somehow managed to circumvent that but now other problem, any ideas?
ifort -i8 -align -w -g -vec-report1 -O2 -g -L/home/jbaltrus/nwchem/6.4devJuly2013/nwchem-src-2013-07-19/lib/LINUX64 -L/home/jbaltrus/nwchem/6.4devJuly2013/nwchem-src-2013-07-19/src/tools/install/lib -o /home/jbaltrus/nwchem/6.4devJuly2013/nwchem-src-2013-07-19/bin/LINUX64/nwchem nwchem.o stubs.o -lnwctask -lccsd -lmcscf -lselci -lmp2 -lmoints -lstepper -ldriver -loptim -lnwdft -lgradients -lcphf -lesp -lddscf -ldangchang -lguess -lhessian -lvib -lnwcutil -lrimp2 -lproperty -lnwints -lprepar -lnwmd -lnwpw -lofpw -lpaw -lpspw -lband -lnwpwlib -lnwxc -lcafe -lspace -lanalyze -lqhop -lpfft -ldplot -ldrdy -lvscf -lqmmm -lqmd -letrans -lpspw -ltce -lbq -lcons -lperfm -ldntmc -lccca -lnwcutil -lga -larmci -lpeigs -lperfm -lcons -lbq -lnwcutil -llapack -lblas -L/usr/local/chemistry_software/openmpi-1.6.4-intel/lib -Fa -rpath -lpthread -L/usr/local/chemistry_software/openmpi-1.6.4-intel/lib -lmpi_f90 -lmpi_f77 -lmpi -lstdc++
ld: warning: libifport.so.5, needed by /usr/local/chemistry_software/openmpi-1.6.4-intel/lib/libmpi_f90.so, not found (try using -rpath or -rpath-link)
ld: warning: libifcore.so.5, needed by /usr/local/chemistry_software/openmpi-1.6.4-intel/lib/libmpi_f90.so, not found (try using -rpath or -rpath-link)
ld: warning: libimf.so, needed by /usr/local/chemistry_software/openmpi-1.6.4-intel/lib/libmpi_f90.so, not found (try using -rpath or -rpath-link)
ld: warning: libsvml.so, needed by /usr/local/chemistry_software/openmpi-1.6.4-intel/lib/libmpi_f90.so, not found (try using -rpath or -rpath-link)
ld: warning: libintlc.so.5, needed by /usr/local/chemistry_software/openmpi-1.6.4-intel/lib/libmpi_f90.so, not found (try using -rpath or -rpath-link)
ld: warning: libifcoremt.so.5, needed by /usr/local/chemistry_software/openmpi-1.6.4-intel/lib/libmpi_f90.so, not found (try using -rpath or -rpath-link)
/bin/rm -f nwchem.o stubs.o

Gets Around
Threads 27
Posts 51
this is my script
  1. !/bin/bash
export NWCHEM_TOP=/home/jbaltrus/nwchem/6.4devJuly2013/nwchem-src-2013-07-19
export NWCHEM_TARGET=LINUX64
echo "NWCHEM_TOP=$NWCHEM_TOP"
echo "NWCHEM_TARGET=$NWCHEM_TARGET"

export USE_MPI=y
export USE_MPIF=y
export USE_MPIF4=y
export MPI_LOC=/usr/local/chemistry_software/openmpi-1.6.4-intel
export MPI_LIB=$MPI_LOC/lib
export MPI_INCLUDE=$MPI_LOC/include
export LIBMPI="-Fa -rpath -lpthread -L$MPI_LIB -lmpi_f90 -lmpi_f77 -lmpi"

export NWCHEM_MODULES="all"
export LARGE_FILES=TRUE
export USE_NOFSCHECK=TRUE
export LIB_DEFINES=-DDFLT_TOT_MEM=16777216

PATH=/opt/intel/bin:$PATH

export FC=ifort
export CC=icc

echo "### START MAKING####"

echo "cd $NWCHEM_TOP/src"
cd $NWCHEM_TOP/src
pwd
echo "make nwchem_config"
make nwchem_config NWCHEM_MODULES=all
make >& make.log


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